Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015872554.1_cds_XP_016434820.1_30841
CDS Infomation

[gene=LOC107761152] [db_xref=GeneID:107761152] [protein=protein DENND6A-like isoform X2] [protein_id=XP_016434820.1] [location=join(81252..82849,82997..83189,86181..86201)] [gbkey=CDS]
Sequence

ATGAGCAGATCACCATCATTTTCGGTGAAATCAGAAGCTGATAATTTAAAGATAGATGAA
AAAGCTTTACAGCAGTGGGTAGTTGGGTTCTGTATTATTAGGTTTGATCTAGAACAAGGT
CAGCTCATTGAAGAATGTTACCCCTCGGGCTGTCTAACGCATAATGAGGAGCTTGAAGTT
GCATTTAGCTCATTTCCGGATTCTGTTTCTCAGAGTCATAATCGATCAAGCATCCATGAT
TGTATTTTTTTCTTTCGTGTCCGGAGGCAGGGGAATCCTCTGCCTTCATCCGAGATAGTT
GAAGTAGATAATACTCGAGTGACAGCTACTGATAAGGTGTTAAAACAACGGAATAGAATT
CAAACGGGGACGAATTCTAGATATTTGTATGGTTTTGTGTTTAACAGACAGAGACACGAT
GAAAGGCTTAAACGGGGTGGTGAGCAAAAATCCGTGGTGATTCTTTCTCACAACCCATTT
TCGAGTGTTTTTAGACCTTTGTTGCAGATCATGGGCCCTTTGTACTTTGACATTGGAAAG
AAAGCCCTTAATTTTATTGCTGCCTATGTATCAATGTGGTCTGCTCCTGTACCTGGTCAG
TTAATGGAGCTTCCAATTGGGAATGCTACTCTTAAAGTGAACTTACCACCTGCCCATTGT
ATGCCTTTGGATTGTGGAGTACTTTTTGAAGAGTTGGCTTCTCCAATAGCCCCGTTTCTG
CCTTCCAATCAATCAGTTCCACAAGGTCTTTTCCATGACGCAGATCTTTTTGGGACGTTT
AGGGGACTTTTAATGCAGCTTTGGAAGTTATGGGAATTGTTACTTATTGGAGAACCCATT
CTTATCATAGCGCCAACGCCACCTCAGTGTTGTGAAGCTGTTACTGGTTTGGTTAGTTTG
GTTGCTCCGCTTCTTTGTAGCATTGATTTCAGGCCTTACTTTACTATTCATGATCCAGAT
TTTGCTCATTTAAACTCTCTTCAAGAAGGTGCAGCATTTCCTCCAATGATTTTGGGTGTG
ACAAACCTCTTTTTCTTGAAAGCCCTTCGAAGTATTCCGCATGTTTTATCAGTTGGAAAT
CCTACCGTGAACGCAACTCGACTTCCATTTACTGCTAGAGCTTCAACTGGCAGAATTCCG
GCTGGACCTGAAGGACTTAGTCTTCCTAATCTTTCCTTGAGGAGGTTTGCGCCTTCAAAT
TTTTTGAATGCTATGAAATTGAGGAGAGATGGTCCACTCTGCCTGATGACTGAGCACAAG
GAAGCCATTTGGAGCAGTTACGCTCCAATTACAAAGCCAGACACTTCAATCTTGAATAGG
CTAATTGATGCAGGTTTATCACCCAGGGTAGAGGAATCAATGTCAGTTGTTAATAATGAC
ATACTTCGTCGGCACTTCTTAGAGCTGACAACCAACTTCTTGGCCCCATTTGGCCCATAT
TATAGACCAACAACACCCTCTGAAGGATCTTCTCCATATGTTGATCCTCCTCCTCTACCA
ACATTTAATGCTGAGGACTTCCTCGCTAGCTTATCCGCAAGGGGTCCTGGGAAGTTTCTG
TTGAAGAGGATGAAATCCAACTGGCTGGACCTTTACAGGCGGTTTCTGAAAGGGAACAAT
TTTTTGCCTTGGTTTCAACGAAAGCGTGCTGTTGCTGAACAAGAACAGTGTAGGCTGTGG
AGGCAAGCTAAAATGAGGGCTGACATACAACAGCTGATATCTAGAATGTCTGAGTTGGAG
ATAGTTGATACGTTTAATGCAATTGAGAGGCATCTTCTTGGAGAAATGCAGATAGATGAA
AGAGTGCATTAG

Peptide Sequence

PEP ID

XP_016434820.1
PEP Infomation

PREDICTED: protein DENND6A-like isoform X2 [Nicotiana tabacum]
Sequence

MSRSPSFSVKSEADNLKIDEKALQQWVVGFCIIRFDLEQGQLIEECYPSGCLTHNEELEV
AFSSFPDSVSQSHNRSSIHDCIFFFRVRRQGNPLPSSEIVEVDNTRVTATDKVLKQRNRI
QTGTNSRYLYGFVFNRQRHDERLKRGGEQKSVVILSHNPFSSVFRPLLQIMGPLYFDIGK
KALNFIAAYVSMWSAPVPGQLMELPIGNATLKVNLPPAHCMPLDCGVLFEELASPIAPFL
PSNQSVPQGLFHDADLFGTFRGLLMQLWKLWELLLIGEPILIIAPTPPQCCEAVTGLVSL
VAPLLCSIDFRPYFTIHDPDFAHLNSLQEGAAFPPMILGVTNLFFLKALRSIPHVLSVGN
PTVNATRLPFTARASTGRIPAGPEGLSLPNLSLRRFAPSNFLNAMKLRRDGPLCLMTEHK
EAIWSSYAPITKPDTSILNRLIDAGLSPRVEESMSVVNNDILRRHFLELTTNFLAPFGPY
YRPTTPSEGSSPYVDPPPLPTFNAEDFLASLSARGPGKFLLKRMKSNWLDLYRRFLKGNN
FLPWFQRKRAVAEQEQCRLWRQAKMRADIQQLISRMSELEIVDTFNAIERHLLGEMQIDE
RVH

Transcript Sequence

Gene sequence data has not been registered.